Mission:
In prevision of a maternity leave, a fixed-term contract of 6 months is available from April 2021 within the Clinical Bioinformatics Group included inside the Diagnostic and Theranostic Medecine Division of Curie Institute.
Main activities:
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Implementation of analysis pipelines
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Developpement of custom tools for clinical diagnostic
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Calibration and validation of analysis pipelines
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Help to functionally interpret results using various databases
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Contribute to the evolution and maintenance of diagnostic pipelines: updates, bug reporting, validations
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Contribute to research projects associated with clinical trials
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Regular progress meetings with biologists
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Technological watch
Required skills:
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Proficient with Unix/Linux environment
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Proficient in at least of the following programming languages (ideally with experience with several of them): python, java, R or any other object-oriented programming language
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Good knowledge of standard bioinformatics tools for analyzing and interpreting Next Generation Sequencing data (DNA and RNAseq)
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Have an interest for interactions with biologists
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Rigorous, dynamic, autonomous
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Excellent team work
Desired skills:
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Good knowledge in algorithmics
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Code versioning using git
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Proficient in English (oral and written)
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Some skills in one or several of the following is highly advantageous: usage of calculation cluster (SGE / SLURM / LSF / MOAB, etc.), experience with distributed programming, usage of GPU, experience in machine learning / deep learning
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Some knowledge in oncology is advantageous
Diploma:
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A PhD or MSc in Bioinformatics
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A first experience Next Generation data analysis is preferred
In order to apply, please send an email to bioinfo-clinique[AT]curie.fr
